Variant #0000016477 (NC_000005.9:g.149359855G>C, NC_000005.9(NM_000112.3):c.700-1G>C (SLC26A2))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.149359855G>C
DNA change (hg38) g.149980292G>C
Published as 3' splice acceptor site of the first intron after start codon: AG>AC; ag( IVS- 1 )ac; IVS2-1G>C; c.727-1G>C
ISCN -
DB-ID SLC26A2_000012
Variant remarks 1 American DTD patient (het) and 2 Portugese DTD patients (com-het)
Reference PubMed: Hästbacka et al. 1994, PubMed: Superti-Furga et al. 1996b, PubMed: Superti-Furga et al. 1996a, PubMed: Barbosa et al. 2011
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-11-15 14:17:13 +01:00 (CET)
Date last edited 2020-06-18 08:52:07 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SLC26A2 NM_000112.3 +?/+? 3 c.700-1G>C r.spl? p.?


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