Variant #0000016477 (NC_000005.9:g.149359855G>C, NC_000005.9(NM_000112.3):c.700-1G>C (SLC26A2))
| Chromosome |
5 |
| Allele |
Unknown |
| Affects function (as reported) |
Probably affects function |
| Affects function (by curator) |
Probably affects function |
| Classification method |
- |
| Clinical classification |
likely pathogenic |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.149359855G>C |
| DNA change (hg38) |
g.149980292G>C |
| Published as |
3' splice acceptor site of the first intron after start codon: AG>AC; ag( IVS- 1 )ac; IVS2-1G>C; c.727-1G>C |
| ISCN |
- |
| DB-ID |
SLC26A2_000012 |
| Variant remarks |
1 American DTD patient (het) and 2 Portugese DTD patients (com-het) |
| Reference |
PubMed: Hästbacka et al. 1994, PubMed: Superti-Furga et al. 1996b, PubMed: Superti-Furga et al. 1996a, PubMed: Barbosa et al. 2011 |
| ClinVar ID |
- |
| dbSNP ID |
- |
| Origin |
SUMMARY record |
| Segregation |
yes |
| Frequency |
- |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
Retrieve |
| Owner |
Anne Polvi |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Anne Polvi |
| Date created |
2012-11-15 14:17:13 +01:00 (CET) |
| Date last edited |
2020-06-18 08:52:07 +02:00 (CEST) |

Variant on transcripts
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