Variant #0000016482 (NC_000005.9:g.149360176_149360178del, NM_000112.3:c.1020_1022del (SLC26A2))

Chromosome 5
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.149360176_149360178del
DNA change (hg38) g.149980613_149980615del
Published as ∆gtt (∆V340); 1045–1047delGTT: V340del
ISCN -
DB-ID SLC26A2_000017
Variant remarks Several DTD patients of various ethnicity, also Finnish and Japanese; Functional studies show decreased sulfate transport activity
Reference PubMed: Superti-Furga et al. 1996b, PubMed: Superti-Furga et al. 1996a, PubMed: Hästbacka et al. 1999, PubMed: Cai et al. 1998
ClinVar ID -
dbSNP ID rs121908077
Origin SUMMARY record
Segregation yes
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-11-15 14:17:13 +01:00 (CET)
Date last edited 2020-06-18 08:52:11 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SLC26A2 NM_000112.3 +/+ 3 c.1020_1022del r.(?) p.(Val341del)


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