Variant #0000016482 (NC_000005.9:g.149360176_149360178del, NM_000112.3:c.1020_1022del (SLC26A2))
Chromosome |
5 |
Allele |
Unknown |
Affects function (as reported) |
Affects function |
Affects function (by curator) |
Affects function |
Classification method |
- |
Clinical classification |
pathogenic |
DNA change (genomic) (Relative to hg19 / GRCh37) |
g.149360176_149360178del |
DNA change (hg38) |
g.149980613_149980615del |
Published as |
∆gtt (∆V340); 1045–1047delGTT: V340del |
ISCN |
- |
DB-ID |
SLC26A2_000017 |
Variant remarks |
Several DTD patients of various ethnicity, also Finnish and Japanese; Functional studies show decreased sulfate transport activity |
Reference |
PubMed: Superti-Furga et al. 1996b, PubMed: Superti-Furga et al. 1996a, PubMed: Hästbacka et al. 1999, PubMed: Cai et al. 1998 |
ClinVar ID |
- |
dbSNP ID |
rs121908077 |
Origin |
SUMMARY record |
Segregation |
yes |
Frequency |
- |
Re-site |
- |
VIP |
- |
Methylation |
- |
Average frequency (gnomAD v.2.1.1) |
Retrieve |
Owner |
Anne Polvi |
Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
Created by |
Anne Polvi |
Date created |
2012-11-15 14:17:13 +01:00 (CET) |
Date last edited |
2020-06-18 08:52:11 +02:00 (CEST) |

Variant on transcripts
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