Variant #0000016690 (NC_000014.8:g.(?_23249135)_(23249260_?)del, NC_000014.8(NM_001126105.2):c.500-?_625+?del (SLC7A7))

Chromosome 14
Allele Both (homozygous)
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.(?_23249135)_(23249260_?)del
DNA change (hg38) g.22779926_22780051del
Published as 786del125: Frameshift after I166 (EX4); c.499+?_629-?, genomic rearrangement causing the deletion of the entire exon 4 at the cDNA level; c.500-?_625+?del: p.C167_G209delinsX
ISCN -
DB-ID SLC7A7_000013
Variant remarks 1 Pakistani LPI family (hom).
Reference PubMed: PalacĂ­n et al. 2001, PubMed: Sperandeo et al. 2005
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-04 16:25:21 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SLC7A7 NM_001126105.2 +/+ i03-i04 c.500-?_625+?del r.500_625del p.(Cys167*)


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