Variant #0000016692 (NC_000014.8:g.(?_23248002)_(23249260_?)del, NC_000014.8(NM_001126105.2):c.500-?_770+?del (SLC7A7))
| Chromosome |
14 |
| Allele |
Parent #1 |
| Affects function (as reported) |
Affects function |
| Affects function (by curator) |
Affects function |
| Classification method |
- |
| Clinical classification |
pathogenic |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.(?_23248002)_(23249260_?)del |
| DNA change (hg38) |
g.22778793_22780051del |
| Published as |
IVS3-IVS5del9.7kb (intron 3 - intron 5) : exon 4 and 5 deletion in cDNAIVS3-IVS5del9.7kb (intron 3 - intron 5) : exon 4 and 5 deletion in cDNAIVS3-IVS5del9.7kb (intron 3 - intron 5) : exon 4 and 5 del |
| ISCN |
- |
| DB-ID |
SLC7A7_000014 |
| Variant remarks |
2 Japanese LPI families (1 hom and 1 com-het), 1 Japanese LPI family (com-het); Deletion from intron 3 to intron 5 > deletion of exons 4 and 5 |
| Reference |
PubMed: Shoji et al. 2002, PubMed: Kamada et al. 2001 |
| ClinVar ID |
- |
| dbSNP ID |
- |
| Origin |
SUMMARY record |
| Segregation |
yes |
| Frequency |
0/50 JAP CON |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
Retrieve |
| Owner |
Anne Polvi |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Anne Polvi |
| Date created |
2012-12-04 16:25:21 +01:00 (CET) |
| Date last edited |
2018-03-30 11:49:20 +02:00 (CEST) |

Variant on transcripts
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