Variant #0000016698 (NC_000014.8:g.23249134C>T, NC_000014.8(NM_001126105.2):c.625+1G>A (SLC7A7))

Chromosome 14
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.23249134C>T
DNA change (hg38) g.22779925C>T
Published as 911+1G>A; IVS4+1G>A
ISCN -
DB-ID SLC7A7_000021
Variant remarks 1 Turkish (hom) and 1 Korean (hom) LPI family, 3 Japanese (com-het) LPI families; Mutation causes exon 4 skipping
Reference PubMed: Mykkanen et al. 2000, PubMed: Noguchi et al.v2000, PubMed: Ko et al. 2012
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency 0/50 JAP CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 4.0E-5 View details
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-04 16:25:21 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SLC7A7 NM_001126105.2 +/+ i04 c.625+1G>A r.500_625del p.Cys167*


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