Variant #0000016709 (NC_000014.8:g.23245042C>A, NM_001126105.2:c.998G>T (SLC7A7))

Chromosome 14
Allele Both (homozygous)
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.23245042C>A
DNA change (hg38) g.22775833C>A
Published as p.R333M (c.997G>T)
ISCN -
DB-ID SLC7A7_000032
Variant remarks 1 Turkish LPI family (hom); Several different transcripts: a full length transcript with the R333M mutation and three shorter transcripts with skipping of exon 7 or exons 7 and 9 or exons 6, 7 and 9.
Reference PubMed: Sperandeo et al. 2005
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-04 16:25:21 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SLC7A7 NM_001126105.2 +/+ 07 c.998G>T r.[998g>a, 895_998del, 895_998del; 1096_1245del, 771_998del; 1096_1245del] p.[Arg333Met, Thr299Alafs*13, Thr299Alafs*13, Asn258_Arg333del; Gly366_Lys415del]


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