Variant #0000016717 (NC_000014.8:g.23243622_23243625del, NM_001126105.2:c.1185_1188del (SLC7A7))
| Chromosome |
14 |
| Allele |
Both (homozygous) |
| Affects function (as reported) |
Affects function |
| Affects function (by curator) |
Affects function |
| Classification method |
- |
| Clinical classification |
pathogenic |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.23243622_23243625del |
| DNA change (hg38) |
g.22774413_22774416del |
| Published as |
1425delTTCT: Frameshift after Leu395, termination at codon 516; 1471delTTCT: Frameshift after L395; c.1185_1188delTTCT: p.S396fsX121 |
| ISCN |
- |
| DB-ID |
SLC7A7_000040 See all 2 reported entries |
| Variant remarks |
1 Italian, 1 Tunisian, 1 German and 1 Spanish LPI family (all hom) and 1 French-Algerian LPI family 1 (com-het); Functional studies confirmed disease-causative role |
| Reference |
PubMed: Sperandeo et al. 2000, PubMed: Mykkanen et al. 2000, PubMed: Sperandeo et al. 2005, PubMed: Font-Llitjos et al. 2009 |
| ClinVar ID |
- |
| dbSNP ID |
- |
| Origin |
SUMMARY record |
| Segregation |
yes |
| Frequency |
0/50 CON |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
Retrieve |
| Owner |
Anne Polvi |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Anne Polvi |
| Date created |
2012-12-04 16:25:21 +01:00 (CET) |
| Date last edited |
2020-07-04 15:16:47 +02:00 (CEST) |

Variant on transcripts
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