Variant #0000016733 (NC_000002.11:g.136570172A>G, NM_002299.2:c.2062T>C (LCT))

Chromosome 2
Allele Maternal (confirmed)
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.136570172A>G
DNA change (hg38) g.135812602A>G
Published as c.2062T>C (S688P)
ISCN -
DB-ID LCT_000004
Variant remarks 1 Italian family (com-het) with lactase deficiency, congenital
Reference PubMed: Torniainen et al. 2009
ClinVar ID -
dbSNP ID rs76854071
Origin SUMMARY record
Segregation yes
Frequency 0/101 ITA CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-10 17:13:21 +01:00 (CET)
Date last edited 2019-07-02 08:01:54 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LCT NM_002299.2 +?/+? 8 c.2062T>C r.(2062u>c) p.(Ser688Pro)


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