Variant #0000016735 (NC_000002.11:g.136564701A>T, NM_002299.2:c.4170T>A (LCT))
| Chromosome |
2 |
| Allele |
Unknown |
| Affects function (as reported) |
Affects function |
| Affects function (by curator) |
Affects function |
| Classification method |
- |
| Clinical classification |
pathogenic |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.136564701A>T |
| DNA change (hg38) |
g.135807131A>T |
| Published as |
c.4170T>A: Y1390X |
| ISCN |
- |
| DB-ID |
LCT_000006 |
| Variant remarks |
Finnish major mutation (FINMajor) for lactase deficiency, congenital: 26 Finnish families (most hom) with the disease |
| Reference |
PubMed: Kuokkanen et al. 2006, PubMed: Torniainen et al. 2009 |
| ClinVar ID |
- |
| dbSNP ID |
rs121908936 |
| Origin |
SUMMARY record |
| Segregation |
yes |
| Frequency |
4/140 NIL CON |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
0.00089 View details |
| Owner |
Anne Polvi |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Anne Polvi |
| Date created |
2012-12-10 17:13:21 +01:00 (CET) |
| Date last edited |
2019-07-02 08:01:36 +02:00 (CEST) |

Variant on transcripts
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