Variant #0000016736 (NC_000002.11:g.136562382G>C, NM_002299.2:c.4419C>G (LCT))

Chromosome 2
Allele Maternal (confirmed)
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.136562382G>C
DNA change (hg38) g.135804812G>C
Published as c.4419C>G (p.Y1473X)
ISCN -
DB-ID LCT_000007
Variant remarks 1 Japanese family (com-het) with probable lactase deficiency, congenital
Reference PubMed: Uchida et al. 2012
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-10 17:13:21 +01:00 (CET)
Date last edited 2019-07-02 08:01:54 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LCT NM_002299.2 +?/+? 10 c.4419C>G r.(4419c>g) p.(Tyr1473*)


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