Variant #0000016739 (NC_000002.11:g.136552324_136552327del, NM_002299.2:c.4998_5001del (LCT))

Chromosome 2
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.136552324_136552327del
DNA change (hg38) g.135794754_135794757del
Published as c.4998_5001delTGAG: S1666fsX1722
ISCN -
DB-ID LCT_000010
Variant remarks 2 Finnish families (com-het) with lactase deficiency, congenital
Reference PubMed: Kuokkanen et al. 2006
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency 0/556 FIN CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-10 17:13:21 +01:00 (CET)
Date last edited 2020-06-09 13:16:38 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LCT NM_002299.2 +/+ 14 c.4998_5001del r.(4998_5001del) p.(Ser1666Argfs*56)


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