Variant #0000016827 (NC_000019.9:g.36342511_36342512del, NM_004646.3:c.121_122del (NPHS1))

Chromosome 19
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Affects function
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.36342511_36342512del
DNA change (hg38) g.35851609_35851610del
Published as Deletion of nucleotides 121-122 (CT) in exon 2; nt121(del2): frameshift, truncated 90-residue protein. Finmajor mutation.
ISCN -
DB-ID NPHS1_000014
Variant remarks Finnish Major CNF mutation (Finmajor): >44 Finnish CNF patients (most hom), 1 North American CNF patient (com-het) and 2 Swedish CNF families (1 hom and 1 com-het)
Reference PubMed: Kestila et al. 1998,PubMed: Lenkkeri at al. 1999
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency 1/83 FIN CON (h
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00115 View details
Owner Anne Polvi
Database submission license No license selected
Created by Anne Polvi
Date created 2012-12-10 17:38:49 +01:00 (CET)
Date last edited 2020-07-15 17:21:47 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
NPHS1 NM_004646.3 +/+ 02 c.121_122del r.(?) p.(Leu41Aspfs*50)


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