Variant #0000016840 (NC_000019.9:g.36341874_36341876del, NM_004646.3:c.515_517del (NPHS1))

Chromosome 19
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.36341874_36341876del
DNA change (hg38) g.35850972_35850974del
Published as nt514(delACC): delT172; 513-5delCAC: del172T; c.514_516delACC: p.T172del
ISCN -
DB-ID NPHS1_000027 See all 2 reported entries
Variant remarks 1 Dutch CNF family (com-het), 1 Middle Eastern (hom) and 1 Egyptian (hom) CNF patient and CNF patients with non specified number and origin
Reference PubMed: Lenkkeri at al. 1999, PubMed: Beltcheva et al. 2001, PubMed: Koziell et al. 2002, PubMed: Schoeb et al. 2010
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency 0/93 CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-10 17:38:49 +01:00 (CET)
Date last edited 2020-07-15 17:21:13 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
NPHS1 NM_004646.3 +?/+? 04 c.515_517del r.(?) p.(Thr172del)


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