Variant #0000016890 (NC_000019.9:g.36336332C>A, NM_004646.3:c.1868G>T (NPHS1))

Chromosome 19
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Probably affects function
Classification method -
Clinical classification likely pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.36336332C>A
DNA change (hg38) g.35845430C>A
Published as exon 14 nt1868(G>T): Cys623>Phe; c.G1868T: p.C623F
ISCN -
DB-ID NPHS1_000077 See all 6 reported entries
Variant remarks 1 North American CNF family (com-het) and 1 English (com-het), 1 German (hom), 1 Spanish (com-het) and 1 Caucasian (het) CNF patient
Reference PubMed: Lenkkeri at al. 1999, PubMed: Koziell et al. 2002, PubMed: Schoeb et al. 2010, PubMed: Santin et al. 2009
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation yes
Frequency 0/93 CON
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 4.0E-5 View details
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2012-12-10 17:38:49 +01:00 (CET)
Date last edited 2017-05-05 19:04:32 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
NPHS1 NM_004646.3 +?/+? 14 c.1868G>T r.(1868g>u) p.(Cys623Phe)


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