Variant #0000017051 (NC_000001.10:g.46657769C>T, NC_000001.10(NM_001243766.1):c.1539+1G>A (POMGNT1))

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic (recessive)
DNA change (genomic) (Relative to hg19 / GRCh37) g.46657769C>T
DNA change (hg38) g.46192097C>T
Published as IVS17+1G>A: Glu514read-through 526Stop/Leu472-His513del
ISCN -
DB-ID POMGNT1_000002 See all 49 reported entries
Variant remarks Finnish Major/Founder MDDGA3(MEB) variant, causes splice defect, either exon 18 skipping or intron 18 inclusion
Reference -
ClinVar ID -
dbSNP ID -
Origin SUMMARY record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00063 View details
Owner Anne Polvi
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Anne Polvi
Date created 2013-01-31 14:09:45 +01:00 (CET)
Date last edited 2022-03-08 20:46:45 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
POMGNT1 NM_001243766.1 +/. 17i c.1539+1G>A r.spl p.?
POMGNT1 NM_017739.3 +/. - c.1539+1G>A r.spl p.?


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