Variant #0000023424 (NC_000010.10:g.114758349C>T, NC_000010.10(NM_030756.4):c.382-41435C>T (TCF7L2))

Chromosome 10
Allele Unknown
Affects function (as reported) Probably affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.114758349C>T
DNA change (hg38) g.112998590C>T
Published as -
ISCN -
DB-ID TCF7L2_000002 See all 2 reported entries
Variant remarks pull-down combined with mass spectrophotometry revealed the most abundant binding proteins to be bound to an oligo harboring this sequence - Poly (ADP-ribose) polymerase 1 (PARP-1), DNA topoisomerase I and ATP-dependent RNA helicase A. The less abundant binding proteins, X-ray repair cross-complementing 5 (XRCC5) and RPA/p70, showed evidence of allele specific binding.
Reference PubMed: Xia 2014
ClinVar ID -
dbSNP ID rs7903146
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Struan Grant
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2014-01-29 17:04:16 +01:00 (CET)
Date last edited 2020-07-14 21:50:58 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TCF7L2 NM_030756.4 +?/. 3i c.382-41435C>T r.(=) p.(=)


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