Variant #0000039002 (NC_000012.11:g.89328335T>C, NM_000899.4:c.-354280A>G (KITLG))
| Chromosome |
12 |
| Allele |
Parent #1 |
| Affects function (as reported) |
Affects function |
| Affects function (by curator) |
Not classified |
| Classification method |
- |
| Clinical classification |
NA |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.89328335T>C |
| DNA change (hg38) |
g.88934558T>C |
| Published as |
- |
| ISCN |
- |
| DB-ID |
KITLG_000001 See all 3 reported entries |
| Variant remarks |
reduced LEF1 binding; KITLG expression 20% reduced in hair follicles; influences hair pigmentation, shift towards blond |
| Reference |
PubMed: Guenther 2014 |
| ClinVar ID |
- |
| dbSNP ID |
rs12821256 |
| Origin |
In vitro (cloned) |
| Segregation |
- |
| Frequency |
- |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
Retrieve |
| Owner |
Johan den Dunnen |
| Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
| Created by |
Johan den Dunnen |
| Date created |
2014-07-21 20:05:25 +02:00 (CEST) |
| Date last edited |
2020-07-14 21:50:58 +02:00 (CEST) |

Variant on transcripts
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