Variant #0000039974 (NC_000006.11:g.18139228C>T, NM_000367.2:c.460G>A (TPMT))

Chromosome 6
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.18139228C>T
DNA change (hg38) g.18138997C>T
Published as -
ISCN -
DB-ID TPMT_000030 See all 84 reported entries
Variant remarks 9x reduced TPMT catalytic activity, instable at 37oC
Reference PubMed: Tai 1996, OMIM:var0002
ClinVar ID -
dbSNP ID rs1800460
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.02809 View details
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2012-09-23 20:52:13 +02:00 (CEST)
Date last edited 2020-07-14 22:00:02 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

Haplotype     

RNA change     

Protein     
TPMT NM_000367.2 +/. 6 c.460G>A TPMT*3B r.(?) p.Ala154Thr


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