Variant #0000053083 (NC_000023.10:g.29686547_29686621del, IL1RAPL1(NM_014271.3):c.704_778del)
Chromosome |
X |
Allele |
Unknown |
Affects function (as reported) |
Affects function |
Affects function (by curator) |
Not classified |
Classification method |
- |
Clinical classification |
NA |
DNA change (genomic) (Relative to hg19 / GRCh37) |
g.29686547_29686621del |
DNA change (hg38) |
g.29668430_29668504del |
Published as |
- |
ISCN |
- |
DB-ID |
IL1RAPL1_000014 |
Variant remarks |
expression cloning shows IL1RAPL1 instability and mislocalization within dendrites; failure to induce pre- and post-synaptic differentiation; HEK293 cells reduced interaction IL1RAPL1/PTPdelta; no effect on cellular signaling (still activating JNK pathway) |
Reference |
PubMed: Ramos-Brossier 2015, Journal: Ramos-Brossier 2015 |
ClinVar ID |
- |
dbSNP ID |
- |
Origin |
In vitro (cloned) |
Segregation |
no |
Frequency |
- |
Re-site |
- |
VIP |
- |
Methylation |
- |
Average frequency (gnomAD v.2.1.1) |
Retrieve |
Owner |
Johan den Dunnen |
Database submission license |
Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International |
Created by |
Johan den Dunnen |

Variant on transcripts
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