Variant #0000058641 (NC_000004.11:g.111539815C>T, NM_153426.2:c.420G>A (PITX2))

Chromosome 4
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.111539815C>T
DNA change (hg38) g.110618659C>T
Published as NM_000325.5:c.441G>A (W147X)
ISCN -
DB-ID PITX2_000029 See all 3 reported entries
Variant remarks W147X expression cloning CHO cells reduced activation (0.3) atrial natriuretic factor promoter
Reference PubMed: Wang 2013, Journal: Wang 2013
ClinVar ID -
dbSNP ID -
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2015-02-20 22:01:13 +01:00 (CET)
Date last edited 2020-07-14 21:50:58 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PITX2 NM_000325.5 ?/. - c.441G>A r.(?) p.(Trp147*)
PITX2 NM_153426.2 ?/. 6 c.420G>A r.(?) p.(Trp140*)


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