Variant #0000084556 (NC_000004.11:g.89442804A>G, NM_001042616.2:c.137T>C (PIGY))

Chromosome 4
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.89442804A>G
DNA change (hg38) g.88521653A>G
Published as -
ISCN -
DB-ID PIGY_000002 See all 3 reported entries
Variant remarks expression cloning (human cells) shows reduced PIGY protein stability, yielding lower protein levels and reduced capacity to synthesize GPI anchors for correct protein targeting to the cell surface
Reference PubMed: Ilkovski 2015, Journal: Ilkovski 2015
ClinVar ID -
dbSNP ID -
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2015-11-07 18:59:44 +01:00 (CET)
Date last edited 2020-07-14 21:50:58 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PIGY NM_001042616.2 +/. 2 c.137T>C r.(?) p.Leu46Pro


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