Genomic variant #0000088209

Individual ID 00057920
Chromosome 16
Allele Paternal (inferred)
Affects function (as reported) Affects function
Affects function (by curator) Affects function
DNA change (genomic) (Relative to hg19 / GRCh37) g.58036551T>G
DNA change (hg38) g.58002647T>G
Published as -
ISCN -
DB-ID USB1_000005 See all 2 reported entries
Variant remarks -
Reference PubMed: Colombo et al. 2012
ClinVar ID -
dbSNP ID -
Origin Germline
Segregation yes
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Variant not found in online data sets
Owner Lidia Larizza




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

ClassClinical     

RNA change     

Protein     
USB1 NM_024598.3 +/+ 2i c.265+2T>G - r.spl p.(Tyr89Trpfs*3)



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000057883 DNA;RNA PCR;RT-PCR;SEQ - - USB1 2 Ludovica Volpi