Variant #0000117571 (NC_000010.10:g.103990609del, NM_005029.3:c.573del (PITX3))

Chromosome 10
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.103990609del
DNA change (hg38) g.102230852del
Published as -
ISCN -
DB-ID PITX3_000005 See all 2 reported entries
Variant remarks IHC shows retained nuclear localization; pcDNA3.1 in vitro expression cloning in B3 cells shows decreased DNA-binding, luciferase assay in lens epithelial cells shows reduced (0.17) transactivation activity
Reference PubMed: Verdin 2014, Journal: Verdin 2014
ClinVar ID -
dbSNP ID -
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2016-06-18 09:57:15 +02:00 (CEST)
Date last edited 2020-07-14 21:50:58 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PITX3 NM_005029.3 +/. 4 c.573del r.(?) p.Ser192Alafs*117


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