Variant #0000129885 (NC_000005.9:g.169533444_169533446del, NM_012188.4:c.483_485del (FOXI1))

Chromosome 5
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.169533444_169533446del
DNA change (hg38) g.170106440_170106442del
Published as N161del
ISCN -
DB-ID FOXI1_000004 See all 3 reported entries
Variant remarks FOX1 expression cloning and analysis in a promoter-reporter assay shows significantly decreased transcription of a SLC26A4 construct
Reference PubMed: Yang 2007, Journal: Yang 2007
ClinVar ID -
dbSNP ID -
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2016-09-09 15:56:11 +02:00 (CEST)
Date last edited 2020-07-14 21:50:58 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
FOXI1 NM_012188.4 +/. 1 c.483_485del r.(?) p.Asn161del


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