Variant #0000163082 (NC_000002.11:g.108609448C>T, NM_021815.2:c.313C>T (SLC5A7))

Chromosome 2
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification NA
DNA change (genomic) (Relative to hg19 / GRCh37) g.108609448C>T
DNA change (hg38) g.107992992C>T
Published as -
ISCN -
DB-ID SLC5A7_000002 See all 2 reported entries
Variant remarks cDNA expression cloning in HEK293T shows normal cell trafficking and significantly reduced choline uptake
Reference PubMed: Bauche 2016, Journal: Bauche 2016, OMIM:var0003
ClinVar ID -
dbSNP ID -
Origin In vitro (cloned)
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner Johan den Dunnen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by Johan den Dunnen
Date created 2017-02-10 17:43:29 +01:00 (CET)
Date last edited 2020-07-14 21:50:58 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SLC5A7 NM_021815.2 +/. 4 c.313C>T r.(?) p.Pro105Ser


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