Variant #0000171441 (NC_000008.10:g.23058220T>G, NM_003844.3:c.683A>C (TNFRSF10A))
| Individual ID |
00105390 |
| Chromosome |
8 |
| Allele |
Unknown |
| Affects function (as reported) |
Effect unknown |
| Affects function (by curator) |
Effect unknown |
| Classification method |
- |
| Clinical classification |
VUS |
| DNA change (genomic) (Relative to hg19 / GRCh37) |
g.23058220T>G |
| DNA change (hg38) |
g.23200707T>G |
| Published as |
- |
| ISCN |
- |
| DB-ID |
TNFRSF10A_000005 See all 6 reported entries |
| Variant remarks |
659 colorectal cancer patients were sequenced for these two variants. Variant 683G>C did not appear to be associated with an increased colorectal cancer risk. The 683C-626C haplotype conferred a 2.4 fold colorectal cancer risk. |
| Reference |
PubMed: Frank 2006 |
| ClinVar ID |
- |
| dbSNP ID |
rs20576 |
| Origin |
Unknown |
| Segregation |
- |
| Frequency |
- |
| Re-site |
- |
| VIP |
- |
| Methylation |
- |
| Average frequency (gnomAD v.2.1.1) |
0.15189 View details |
| Owner |
Zoe Baily |
| Database submission license |
No license selected |
| Created by |
Zoe Baily |
| Date created |
2012-04-26 15:18:20 +02:00 (CEST) |
| Date last edited |
2017-06-23 12:26:32 +02:00 (CEST) |

Variant on transcripts
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