Genomic variant #0000181956

Individual ID 00112657
Chromosome 18
Allele Parent #1
Affects function (as reported) Affects function
Affects function (by curator) Not classified
DNA change (genomic) (Relative to hg19 / GRCh37) g.(52000000_52895125)_(62258013_63000000)del
DNA change (hg38) -
Published as hg18? g.51046123-60408993del
ISCN 18q21.2-q22.1del
DB-ID TCF4_000016
Variant remarks 9.36 Mb deletion
Reference PubMed: Giurgea 2008
ClinVar ID -
dbSNP ID -
Origin De novo
Segregation -
Frequency -
Re-site -
VIP 0
Methylation -
Average frequency (large NGS studies) Variant not found in online data sets
Owner Irina Giurgea




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

Haplotype     

ClassClinical     

RNA change     

Protein     
TCF4 NM_001083962.1 +/. _1_20_ c.(?_-1)_(*1_?)del - - r.0 p.0



Screenings


AscendingScreening ID     

Template     

Technique     

Tissue     

Remarks     

Genes screened     

Variants found     

Owner     
0000113115 DNA arrayCGH - - TCF4 1 Irina Giurgea