Variant #0000251167 (NC_000019.9:g.50367486A>T, NM_007254.3:c.586T>A (PNKP))

Chromosome 19
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.50367486A>T
DNA change (hg38) g.49864229A>T
Published as PNKP(NM_007254.4):c.586T>A (p.Y196N)
ISCN -
DB-ID PNKP_000030
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00254 View details
Owner VKGL-NL_Utrecht
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Utrecht
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2022-11-01 13:01:21 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PNKP NM_007254.3 -/. - c.586T>A r.(?) p.(Tyr196Asn)
PTOV1 NM_017432.3 -/. - c.*3950A>T r.(=) p.(=)
TBC1D17 NM_024682.2 -/. - c.-13495A>T r.(?) p.(=)
AKT1S1 NM_032375.4 -/. - c.*5688T>A r.(=) p.(=)


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