Variant #0000255172 (NC_000005.9:g.140222168A>G, NC_000005.9(NM_018900.2):c.2394+53899A>G (PCDHA1))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140222168A>G
DNA change (hg38) -
Published as PCDHA8(NM_018911.3):c.1262A>G (p.Y421C)
ISCN -
DB-ID PCDHA1_000010
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 1.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHAC1 NM_018898.3 -?/. - c.-84310A>G r.(?) p.(=)
PCDHAC2 NM_018899.5 -?/. - c.-124184A>G r.(?) p.(=)
PCDHA1 NM_018900.2 -?/. - c.2394+53899A>G r.(=) p.(=)
PCDHA10 NM_018901.2 -?/. - c.-13466A>G r.(?) p.(=)
PCDHA11 NM_018902.3 -?/. - c.-26521A>G r.(?) p.(=)
PCDHA12 NM_018903.2 -?/. - c.-32890A>G r.(?) p.(=)
PCDHA13 NM_018904.2 -?/. - c.-39686A>G r.(?) p.(=)
PCDHA2 NM_018905.2 -?/. - c.2388+45231A>G r.(=) p.(=)
PCDHA3 NM_018906.2 -?/. - c.2394+38992A>G r.(=) p.(=)
PCDHA4 NM_018907.2 -?/. - c.2385+33011A>G r.(=) p.(=)
PCDHA5 NM_018908.2 -?/. - c.2352+18456A>G r.(=) p.(=)
PCDHA6 NM_018909.2 -?/. - c.2394+12098A>G r.(=) p.(=)
PCDHA7 NM_018910.2 -?/. - c.2355+5845A>G r.(=) p.(=)
PCDHA8 NM_018911.2 -?/. - c.1262A>G r.(?) p.(Tyr421Cys)
PCDHA9 NM_031857.1 -?/. - c.-5913A>G r.(?) p.(=)


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