Variant #0000264245 (NC_000019.9:g.47112219T>A, NM_001205281.1:c.-7993A>T (PPP5D1))

Chromosome 19
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.47112219T>A
DNA change (hg38) g.46608962T>A
Published as CALM3(NM_005184.4):c.402T>A (p.D134E)
ISCN -
DB-ID CALM3_000007
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_AMC
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_AMC
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PTGIR NM_000960.3 ?/. - c.*12318A>T r.(=) p.(=)
PPP5D1 NM_001205281.1 ?/. - c.-7993A>T r.(?) p.(=)
CALM3 NM_005184.2 ?/. - c.402T>A r.(?) p.(Asp134Glu)


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