Variant #0000266497 (NC_000011.9:g.65788072C>T, NM_006842.2:c.-31784C>T (SF3B2))

Chromosome 11
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.65788072C>T
DNA change (hg38) g.66020601C>T
Published as CATSPER1(NM_053054.4):c.1954G>A (p.V652I)
ISCN -
DB-ID CATSPER1_000001
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.98139 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SF3B2 NM_006842.2 -/. - c.-31784C>T r.(?) p.(=)
GAL3ST3 NM_033036.2 -/. - c.*21906G>A r.(=) p.(=)
CATSPER1 NM_053054.3 -/. - c.1954G>A r.(?) p.(Val652Ile)


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