Variant #0000274585 (NC_000011.9:g.57569620C>T, NM_015959.3:c.*61903C>T (TMX2))

Chromosome 11
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.57569620C>T
DNA change (hg38) g.57802148C>T
Published as CTNND1(NM_001085458.1):c.1372C>T (p.R458*)
ISCN -
DB-ID CTNND1_000001 See all 6 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-06-30 16:38:40 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNND1 NM_001085458.1 +/. - c.1372C>T r.(?) p.(Arg458Ter)
BTBD18 NM_001145101.1 +/. - c.-50656G>A r.(?) p.(=)
TMX2 NM_015959.3 +/. - c.*61903C>T r.(=) p.(=)
C11orf31 NM_170746.2 +/. - c.*59316C>T r.(=) p.(=)
TMX2-CTNND1 NR_037646.1 +/. - n.1931C>T r.(?) -


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