Variant #0000289249 (NC_000002.11:g.74757554G>T, NM_032603.2:c.*3179C>A (LOXL3))

Chromosome 2
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.74757554G>T
DNA change (hg38) g.74530427G>T
Published as HTRA2(NM_013247.4):c.421G>T (p.A141S)
ISCN -
DB-ID HTRA2_000004
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.01918 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
HTRA2 NM_013247.4 -/. - c.421G>T r.(?) p.(Ala141Ser)
LOXL3 NM_032603.2 -/. - c.*3179C>A r.(=) p.(=)
DQX1 NM_133637.2 -/. - c.-4311C>A r.(?) p.(=)
AUP1 NM_181575.3 -/. - c.-798C>A r.(?) p.(=)


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