Variant #0000296796 (NC_000005.9:g.140720516C>G, NM_018916.3:c.-3085C>G (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140720516C>G
DNA change (hg38) -
Published as PCDHGA1(NM_018912.3):c.2421+7844C>G, PCDHGA2(NM_018915.4):c.1978C>G (p.L660V)
ISCN -
DB-ID PCDHGA1_000003
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.47472 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 -/. - c.-135168C>G r.(?) p.(=)
PCDHGA12 NM_003735.2 -/. - c.-89811C>G r.(?) p.(=)
PCDHGB4 NM_003736.2 -/. - c.-46936C>G r.(?) p.(=)
PCDHGA1 NM_018912.2 -/. - c.2421+7844C>G r.(=) p.(=)
PCDHGA10 NM_018913.2 -/. - c.-72227C>G r.(?) p.(=)
PCDHGA11 NM_018914.2 -/. - c.-80279C>G r.(?) p.(=)
PCDHGA2 NM_018915.2 -/. - c.1978C>G r.(?) p.(Leu660Val)
PCDHGA3 NM_018916.3 -/. - c.-3085C>G r.(?) p.(=)
PCDHGA4 NM_018917.2 -/. - c.-14252C>G r.(?) p.(=)
PCDHGA5 NM_018918.2 -/. - c.-23382C>G r.(?) p.(=)
PCDHGA6 NM_018919.2 -/. - c.-33135C>G r.(?) p.(=)
PCDHGA7 NM_018920.2 -/. - c.-41951C>G r.(?) p.(=)
PCDHGA9 NM_018921.2 -/. - c.-62004C>G r.(?) p.(=)
PCDHGB1 NM_018922.2 -/. - c.-9312C>G r.(?) p.(=)
PCDHGB2 NM_018923.2 -/. - c.-19187C>G r.(?) p.(=)
PCDHGB3 NM_018924.2 -/. - c.-29446C>G r.(?) p.(=)
PCDHGB5 NM_018925.2 -/. - c.-57179C>G r.(?) p.(=)
PCDHGB6 NM_018926.2 -/. - c.-67254C>G r.(?) p.(=)
PCDHGB7 NM_018927.3 -/. - c.-76911C>G r.(?) p.(=)
PCDHGC4 NM_018928.2 -/. - c.-144225C>G r.(?) p.(=)
PCDHGC5 NM_018929.2 -/. - c.-148292C>G r.(?) p.(=)
PCDHGA8 NM_032088.1 -/. - c.-51865C>G r.(?) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.