Variant #0000301138 (NC_000001.10:g.46657769C>T, NC_000001.10(NM_001243766.1):c.1539+1G>A (POMGNT1))

Chromosome 1
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.46657769C>T
DNA change (hg38) g.46192097C>T
Published as POMGNT1(NM_001243766.1):c.1539+1G>A, POMGNT1(NM_001243766.2):c.1539+1G>A
ISCN -
DB-ID POMGNT1_000002 See all 49 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00063 View details
Owner VKGL-NL_Utrecht
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Utrecht
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2023-01-11 15:44:22 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
LURAP1 NM_001013615.2 +/. - c.-11330C>T r.(?) p.(=)
POMGNT1 NM_001243766.1 +/. - c.1539+1G>A r.spl? p.?
POMGNT1 NM_017739.3 +/. - c.1539+1G>A r.spl? p.?


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