Variant #0000306609 (NC_000003.11:g.47452825G>A, NM_015466.2:c.3537G>A (PTPN23))

Chromosome 3
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.47452825G>A
DNA change (hg38) g.47411335G>A
Published as PTPN23(NM_015466.3):c.3537G>A (p.E1179=)
ISCN -
DB-ID PTPN23_000003
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 2.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-06-15 08:57:06 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SCAP NM_012235.2 -?/. - c.*2519C>T r.(=) p.(=)
PTPN23 NM_015466.2 -?/. - c.3537G>A r.(?) p.(Glu1179=)


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