Variant #0000312040 (NC_000003.11:g.48508366G>C, NM_016381.4:c.477G>C (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.48508366G>C
DNA change (hg38) g.48466967G>C
Published as TREX1(NM_033629.6):c.312G>C (p.L104=)
ISCN -
DB-ID ATRIP_000017
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0001 View details
Owner VKGL-NL_Groningen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Groningen
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2022-11-01 13:01:21 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 -?/. - c.477G>C r.(?) p.(Leu159=)
SHISA5 NM_016479.3 -?/. - c.*2140C>G r.(=) p.(=)
TREX1 NM_033629.3 -?/. - c.312G>C r.(?) p.(Leu104=)
ATRIP NM_130384.2 -?/. - c.*1413G>C r.(=) p.(=)


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