Variant #0000313183 (NC_000005.9:g.179251313G>A, NM_003900.4:c.663G>A (SQSTM1))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.179251313G>A
DNA change (hg38) g.179824313G>A
Published as SQSTM1(NM_003900.5):c.663G>A (p.T221=)
ISCN -
DB-ID SQSTM1_000015
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 4.0E-5 View details
Owner VKGL-NL_VUmc
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_VUmc
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-06-18 11:21:40 +02:00 (CEST)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SQSTM1 NM_003900.4 -?/. - c.663G>A r.(?) p.(Thr221=)
MGAT4B NM_014275.4 -?/. - c.-17730C>T r.(?) p.(=)
C5orf45 NM_016175.3 -?/. - c.*13078C>T r.(=) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.