Variant #0000313190 (NC_000005.9:g.179260231C>T, NM_003900.4:c.954C>T (SQSTM1))

Chromosome 5
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.179260231C>T
DNA change (hg38) g.179833231C>T
Published as SQSTM1(NM_003900.5):c.954C>T (p.S318=)
ISCN -
DB-ID SQSTM1_000024 See all 2 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0211 View details
Owner VKGL-NL_VUmc
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_VUmc
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2025-05-05 21:14:00 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
SQSTM1 NM_003900.4 -/. - c.954C>T r.(?) p.(Ser318=)
MGAT4B NM_014275.4 -/. - c.-26648G>A r.(?) p.(=)
C5orf45 NM_016175.3 -/. - c.*4160G>A r.(=) p.(=)


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