Variant #0000317028 (NC_000003.11:g.48507872C>T, NM_016381.4:c.-18C>T (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.48507872C>T
DNA change (hg38) g.48466473C>T
Published as ATRIP(NM_130384.3):c.*919C>T
ISCN -
DB-ID ATRIP_000008
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 2.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 -/. - c.-18C>T r.(?) p.(=)
SHISA5 NM_016479.3 -/. - c.*2634G>A r.(=) p.(=)
TREX1 NM_033629.3 -/. - c.-26-157C>T r.(=) p.(=)
ATRIP NM_130384.2 -/. - c.*919C>T r.(=) p.(=)


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