Variant #0000317982 (NC_000021.8:g.45941761C>T, NC_000021.8(NM_144991.2):c.1566+5G>A (TSPEAR))

Chromosome 21
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.45941761C>T
DNA change (hg38) g.44521878C>T
Published as TSPEAR(NM_001272037.1):c.1362+5G>A
ISCN -
DB-ID TSPEAR_000005
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00111 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-07-16 22:43:08 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSPEAR NM_144991.2 -?/. - c.1566+5G>A r.spl? p.?
KRTAP12-2 NM_181684.2 -?/. - c.*144602G>A r.(=) p.(=)
KRTAP12-1 NM_181686.1 -?/. - c.*159987G>A r.(=) p.(=)
KRTAP10-10 NM_181688.1 -?/. - c.-115574C>T r.(?) p.(=)
KRTAP10-4 NM_198687.1 -?/. - c.-51875C>T r.(?) p.(=)
KRTAP10-6 NM_198688.2 -?/. - c.*69507G>A r.(=) p.(=)
KRTAP10-7 NM_198689.2 -?/. - c.-78761C>T r.(?) p.(=)
KRTAP10-9 NM_198690.2 -?/. - c.-105328C>T r.(?) p.(=)
KRTAP10-1 NM_198691.2 -?/. - c.*17424G>A r.(=) p.(=)
KRTAP10-11 NM_198692.2 -?/. - c.-124615C>T r.(?) p.(=)
KRTAP10-2 NM_198693.2 -?/. - c.*28813G>A r.(=) p.(=)
KRTAP10-5 NM_198694.2 -?/. - c.*57879G>A r.(=) p.(=)
KRTAP10-8 NM_198695.2 -?/. - c.-90257C>T r.(?) p.(=)
KRTAP10-3 NM_198696.2 -?/. - c.*36172G>A r.(=) p.(=)
KRTAP12-3 NM_198697.2 -?/. - c.-136136C>T r.(?) p.(=)
KRTAP12-4 NM_198698.1 -?/. - c.*132432G>A r.(=) p.(=)
KRTAP10-12 NM_198699.1 -?/. - c.-175356C>T r.(?) p.(=)


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