Variant #0000317986 (NC_000021.8:g.45949798C>T, NM_144991.2:c.673G>A (TSPEAR))

Chromosome 21
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.45949798C>T
DNA change (hg38) g.44529915C>T
Published as TSPEAR(NM_001272037.1):c.469G>A (p.A157T)
ISCN -
DB-ID TSPEAR_000007
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 8.0E-5 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TSPEAR NM_144991.2 ?/. - c.673G>A r.(?) p.(Ala225Thr)
KRTAP12-2 NM_181684.2 ?/. - c.*136565G>A r.(=) p.(=)
KRTAP12-1 NM_181686.1 ?/. - c.*151950G>A r.(=) p.(=)
KRTAP10-10 NM_181688.1 ?/. - c.-107537C>T r.(?) p.(=)
KRTAP10-4 NM_198687.1 ?/. - c.-43838C>T r.(?) p.(=)
KRTAP10-6 NM_198688.2 ?/. - c.*61470G>A r.(=) p.(=)
KRTAP10-7 NM_198689.2 ?/. - c.-70724C>T r.(?) p.(=)
KRTAP10-9 NM_198690.2 ?/. - c.-97291C>T r.(?) p.(=)
KRTAP10-1 NM_198691.2 ?/. - c.*9387G>A r.(=) p.(=)
KRTAP10-11 NM_198692.2 ?/. - c.-116578C>T r.(?) p.(=)
KRTAP10-2 NM_198693.2 ?/. - c.*20776G>A r.(=) p.(=)
KRTAP10-5 NM_198694.2 ?/. - c.*49842G>A r.(=) p.(=)
KRTAP10-8 NM_198695.2 ?/. - c.-82220C>T r.(?) p.(=)
KRTAP10-3 NM_198696.2 ?/. - c.*28135G>A r.(=) p.(=)
KRTAP12-3 NM_198697.2 ?/. - c.-128099C>T r.(?) p.(=)
KRTAP12-4 NM_198698.1 ?/. - c.*124395G>A r.(=) p.(=)
KRTAP10-12 NM_198699.1 ?/. - c.-167319C>T r.(?) p.(=)


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