Variant #0000319741 (NC_000020.10:g.2844679G>A, NM_022575.2:c.1561G>A (VPS16))

Chromosome 20
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.2844679G>A
DNA change (hg38) g.2864033G>A
Published as VPS16(NM_022575.4):c.1561G>A (p.D521N)
ISCN -
DB-ID VPS16_000003
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00195 View details
Owner VKGL-NL_Rotterdam
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Rotterdam
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PTPRA NM_002836.3 -/. - c.-837G>A r.(?) p.(=)
VPS16 NM_022575.2 -/. - c.1561G>A r.(?) p.(Asp521Asn)
PCED1A NM_022760.4 -/. - c.-23844C>T r.(?) p.(=)


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