Variant #0000329386 (NC_000003.11:g.48510551_48510553del, NM_016381.4:c.*1552_*1554del (TREX1))

Chromosome 3
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.48510551_48510553del
DNA change (hg38) g.48469152_48469154del
Published as SHISA5(NM_001272065.1):c.658_660del (p.(Pro220del))
ISCN -
DB-ID SHISA5_000001
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-08-06 14:59:34 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
TREX1 NM_016381.4 ?/. - c.*1552_*1554del r.(=) p.(=)
SHISA5 NM_016479.3 ?/. - c.679_681del r.(?) p.(Pro227del)
TREX1 NM_033629.3 ?/. - c.*1552_*1554del r.(=) p.(=)
ATRIP NM_130384.2 ?/. - c.*3598_*3600del r.(=) p.(=)


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