Variant #0000330568 (NC_000005.9:g.140183175A>C, NC_000005.9(NM_018900.2):c.2394+14906A>C (PCDHA1))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140183175A>C
DNA change (hg38) -
Published as PCDHA1(NM_018900.2):c.2394+14906A>C (p.?)
ISCN -
DB-ID PCDHA1_000007
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 3.0E-5 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHAC1 NM_018898.3 ?/. - c.-123303A>C r.(?) p.(=)
PCDHAC2 NM_018899.5 ?/. - c.-163177A>C r.(?) p.(=)
PCDHA1 NM_018900.2 ?/. - c.2394+14906A>C r.(=) p.(=)
PCDHA10 NM_018901.2 ?/. - c.-52459A>C r.(?) p.(=)
PCDHA11 NM_018902.3 ?/. - c.-65514A>C r.(?) p.(=)
PCDHA12 NM_018903.2 ?/. - c.-71883A>C r.(?) p.(=)
PCDHA13 NM_018904.2 ?/. - c.-78679A>C r.(?) p.(=)
PCDHA2 NM_018905.2 ?/. - c.2388+6238A>C r.(=) p.(=)
PCDHA3 NM_018906.2 ?/. - c.2393A>C r.(?) p.(Lys798Thr)
PCDHA4 NM_018907.2 ?/. - c.-3598A>C r.(?) p.(=)
PCDHA5 NM_018908.2 ?/. - c.-18186A>C r.(?) p.(=)
PCDHA6 NM_018909.2 ?/. - c.-24502A>C r.(?) p.(=)
PCDHA7 NM_018910.2 ?/. - c.-30794A>C r.(?) p.(=)
PCDHA8 NM_018911.2 ?/. - c.-37732A>C r.(?) p.(=)
PCDHA9 NM_031857.1 ?/. - c.-44906A>C r.(?) p.(=)


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