Variant #0000330579 (NC_000005.9:g.140237644G>C, NC_000005.9(NM_018900.2):c.2394+69375G>C (PCDHA1))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140237644G>C
DNA change (hg38) -
Published as PCDHA10(NM_018901.2):c.2011G>C (p.(Gly671Arg))
ISCN -
DB-ID PCDHA1_000019
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.0006 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHAC1 NM_018898.3 -?/. - c.-68834G>C r.(?) p.(=)
PCDHAC2 NM_018899.5 -?/. - c.-108708G>C r.(?) p.(=)
PCDHA1 NM_018900.2 -?/. - c.2394+69375G>C r.(=) p.(=)
PCDHA10 NM_018901.2 -?/. - c.2011G>C r.(?) p.(Gly671Arg)
PCDHA11 NM_018902.3 -?/. - c.-11045G>C r.(?) p.(=)
PCDHA12 NM_018903.2 -?/. - c.-17414G>C r.(?) p.(=)
PCDHA13 NM_018904.2 -?/. - c.-24210G>C r.(?) p.(=)
PCDHA2 NM_018905.2 -?/. - c.2388+60707G>C r.(=) p.(=)
PCDHA3 NM_018906.2 -?/. - c.2394+54468G>C r.(=) p.(=)
PCDHA4 NM_018907.2 -?/. - c.2385+48487G>C r.(=) p.(=)
PCDHA5 NM_018908.2 -?/. - c.2352+33932G>C r.(=) p.(=)
PCDHA6 NM_018909.2 -?/. - c.2394+27574G>C r.(=) p.(=)
PCDHA7 NM_018910.2 -?/. - c.2355+21321G>C r.(=) p.(=)
PCDHA8 NM_018911.2 -?/. - c.2394+14344G>C r.(=) p.(=)
PCDHA9 NM_031857.1 -?/. - c.2394+7170G>C r.(=) p.(=)


Screenscraping/webscraping (downloading large amounts of data using scripts) is strictly prohibited.
Use our APIs to retrieve data.