Variant #0000330587 (NC_000005.9:g.140358559G>A, NM_018900.2:c.2420G>A (PCDHA1))

Chromosome 5
Allele Unknown
Affects function (as reported) Probably does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification likely benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.140358559G>A
DNA change (hg38) -
Published as PCDHA1(NM_018900.2):c.2420G>A (p.(Arg807His))
ISCN -
DB-ID PCDHA1_000030
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00126 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHAC1 NM_018898.3 -?/. - c.2459G>A r.(?) p.(Arg820His)
PCDHAC2 NM_018899.5 -?/. - c.2591G>A r.(?) p.(Arg864His)
PCDHA1 NM_018900.2 -?/. - c.2420G>A r.(?) p.(Arg807His)
PCDHA10 NM_018901.2 -?/. - c.2414G>A r.(?) p.(Arg805His)
PCDHA11 NM_018902.3 -?/. - c.2417G>A r.(?) p.(Arg806His)
PCDHA12 NM_018903.2 -?/. - c.2393G>A r.(?) p.(Arg798His)
PCDHA13 NM_018904.2 -?/. - c.2420G>A r.(?) p.(Arg807His)
PCDHA2 NM_018905.2 -?/. - c.2414G>A r.(?) p.(Arg805His)
PCDHA3 NM_018906.2 -?/. - c.2420G>A r.(?) p.(Arg807His)
PCDHA4 NM_018907.2 -?/. - c.2411G>A r.(?) p.(Arg804His)
PCDHA5 NM_018908.2 -?/. - c.2378G>A r.(?) p.(Arg793His)
PCDHA6 NM_018909.2 -?/. - c.2420G>A r.(?) p.(Arg807His)
PCDHA7 NM_018910.2 -?/. - c.2381G>A r.(?) p.(Arg794His)
PCDHA8 NM_018911.2 -?/. - c.2420G>A r.(?) p.(Arg807His)
PCDHA9 NM_031857.1 -?/. - c.2420G>A r.(?) p.(Arg807His)


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