Variant #0000330636 (NC_000005.9:g.140798879G>C, NC_000005.9(NM_018916.3):c.2424+72855G>C (PCDHGA3))

Chromosome 5
Allele Unknown
Affects function (as reported) Effect unknown
Affects function (by curator) Not classified
Classification method -
Clinical classification VUS
DNA change (genomic) (Relative to hg19 / GRCh37) g.140798879G>C
DNA change (hg38) -
Published as PCDHGA1(NM_018912.2):c.2422-75495G>C (p.(=))
ISCN -
DB-ID PCDHGA1_000032
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.00136 View details
Owner VKGL-NL_Leiden
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Leiden
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-03-23 16:13:27 +01:00 (CET)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
PCDHGC3 NM_002588.2 ?/. - c.-56805G>C r.(?) p.(=)
PCDHGA12 NM_003735.2 ?/. - c.-11448G>C r.(?) p.(=)
PCDHGB4 NM_003736.2 ?/. - c.2397+29031G>C r.(=) p.(=)
PCDHGA1 NM_018912.2 ?/. - c.2422-75495G>C r.(=) p.(=)
PCDHGA10 NM_018913.2 ?/. - c.2436+3701G>C r.(=) p.(=)
PCDHGA11 NM_018914.2 ?/. - c.-1916G>C r.(?) p.(=)
PCDHGA2 NM_018915.2 ?/. - c.2425-75495G>C r.(=) p.(=)
PCDHGA3 NM_018916.3 ?/. - c.2424+72855G>C r.(=) p.(=)
PCDHGA4 NM_018917.2 ?/. - c.2421+61691G>C r.(=) p.(=)
PCDHGA5 NM_018918.2 ?/. - c.2421+52561G>C r.(=) p.(=)
PCDHGA6 NM_018919.2 ?/. - c.2424+42805G>C r.(=) p.(=)
PCDHGA7 NM_018920.2 ?/. - c.2424+33989G>C r.(=) p.(=)
PCDHGA9 NM_018921.2 ?/. - c.2424+13936G>C r.(=) p.(=)
PCDHGB1 NM_018922.2 ?/. - c.2409+66643G>C r.(=) p.(=)
PCDHGB2 NM_018923.2 ?/. - c.2421+56756G>C r.(=) p.(=)
PCDHGB3 NM_018924.2 ?/. - c.2415+46503G>C r.(=) p.(=)
PCDHGB5 NM_018925.2 ?/. - c.2397+18788G>C r.(=) p.(=)
PCDHGB6 NM_018926.2 ?/. - c.2418+8692G>C r.(=) p.(=)
PCDHGB7 NM_018927.3 ?/. - c.1453G>C r.(?) p.(Gly485Arg)
PCDHGC4 NM_018928.2 ?/. - c.-65862G>C r.(?) p.(=)
PCDHGC5 NM_018929.2 ?/. - c.-69929G>C r.(?) p.(=)
PCDHGA8 NM_032088.1 ?/. - c.2424+24075G>C r.(=) p.(=)


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