Variant #0000337844 (NC_000017.10:g.3561298G>T, NC_000017.10(NM_001031681.2):c.682-1G>T (CTNS))

Chromosome 17
Allele Unknown
Affects function (as reported) Affects function
Affects function (by curator) Not classified
Classification method -
Clinical classification pathogenic
DNA change (genomic) (Relative to hg19 / GRCh37) g.3561298G>T
DNA change (hg38) g.3658004G>T
Published as -
ISCN -
DB-ID CTNS_000049
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) Retrieve
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2020-07-10 18:43:34 +02:00 (CEST)
Options




Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNS NM_001031681.2 +/. - c.682-1G>T r.spl? p.?
P2RX5 NM_002561.3 +/. - c.*15864C>A r.(=) p.(=)
CTNS NM_004937.2 +/. - c.682-1G>T r.spl? p.?
TAX1BP3 NM_014604.3 +/. - c.*5744C>A r.(=) p.(=)
EMC6 NM_031298.2 +/. - c.-10945G>T r.(?) p.(=)


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