Variant #0000349391 (NC_000017.10:g.3561396C>T, NM_001031681.2:c.779C>T (CTNS))

Chromosome 17
Allele Unknown
Affects function (as reported) Does not affect function
Affects function (by curator) Not classified
Classification method -
Clinical classification benign
DNA change (genomic) (Relative to hg19 / GRCh37) g.3561396C>T
DNA change (hg38) g.3658102C>T
Published as CTNS(NM_001031681.2):c.779C>T (p.T260I), CTNS(NM_004937.3):c.779C>T (p.T260I)
ISCN -
DB-ID CTNS_000051 See all 3 reported entries
Variant remarks VKGL data sharing initiative Nederland
Reference -
ClinVar ID -
dbSNP ID -
Origin CLASSIFICATION record
Segregation -
Frequency -
Re-site -
VIP -
Methylation -
Average frequency (gnomAD v.2.1.1) 0.92654 View details
Owner VKGL-NL_Nijmegen
Database submission license Creative Commons Attribution-NonCommercial-ShareAlike 4.0 InternationalCreative Commons License
Created by VKGL-NL_Nijmegen
Date created 2018-01-15 20:58:59 +01:00 (CET)
Date last edited 2021-09-17 14:40:49 +02:00 (CEST)
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Variant on transcripts


Gene     

AscendingTranscript     

Affects function     

Exon     

DNA change (cDNA)     

RNA change     

Protein     
CTNS NM_001031681.2 -/. - c.779C>T r.(?) p.(Thr260Ile)
P2RX5 NM_002561.3 -/. - c.*15766G>A r.(=) p.(=)
CTNS NM_004937.2 -/. - c.779C>T r.(?) p.(Thr260Ile)
TAX1BP3 NM_014604.3 -/. - c.*5646G>A r.(=) p.(=)
EMC6 NM_031298.2 -/. - c.-10847C>T r.(?) p.(=)


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